Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866221:139866235:[+] chr20:34053968:34053985:[+] nonBSJ supported CDS

circRNA 5':UCCGUGUCU---UCCAGC 3'


            ||| |:|: |||||


target  3':GGGCCCGGGCCGAGGUCA 5'

 -15.40 2 RIC-seq
chrX:139866347:139866361:[+] chr20:34053968:34053985:[+] nonBSJ supported CDS

circRNA 5':UCCGUGUCU---UCCAGC 3'


            ||| |:|: |||||


target  3':GGGCCCGGGCCGAGGUCA 5'

 -15.40 2 RIC-seq