5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA 3' interaction region | CircRNA 5' interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866796:139866824:[+] | chrX:139865339:139865386:[+] | chr20:34129812:34129867:[+] | BSJ supported | 5UTR |
circRNA 5':UCAGGUCUUCCAGUGUCUGCAAUAUCCA-GGGGUUUCCGA-UGGCACCUGUGUCAAGGUCUU-CCAACAACUCCGGGUCU 3' ||| | ::||||:|:| |||| |||| ||| :|| |||| ||| |||| :| target 3': GUCGAAGGGGUCGCGG-------AGGUACCCCU--GGCCGGCCU---------UUCCCCUGCGGUC-----GGCCGGGC 5' |
-44.10 | 1 | RIC-seq |
| chrX:139866796:139866824:[+] | chrX:139865339:139865366:[+] | chr20:34129829:34129867:[+] | BSJ supported | CDS |
circRNA 5':UCAGGUCUUCCAGUGUCUGCAAUAUCCA-GGGGUUUCCGA-UGGCACCUGUGUCAAGGU 3' ||| | ::||||:|:| |||| |||| ||| :|| |||| target 3': GUCGAAGGGGUCGCGG-------AGGUACCCCU--GGCCGGCCU---------UUCC 5' |
-34.80 | 1 | RIC-seq |