Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866055:139866064:[+] chr20:17588053:17588062:[+] nonBSJ supported 3UTR

circRNA 5': UAAUUUGGGU 3'


            ||||||:::


target  3':CAUUAAAUUU 5'

 -3.10 4 RIC-seq
chrX:139866126:139866148:[+] chr20:17588064:17588085:[+] nonBSJ supported 3UTR

circRNA 5':UGGCCUCCAGGUCUUCCAGACUA 3'


            ||||| :|||


target  3': CCGGAAAUGACAAACACUUGAC 5'

 -9.00 23 RIC-seq
chrX:139866134:139866141:[+] chr20:17588079:17588086:[+] nonBSJ supported 3UTR

circRNA 5':AGGUCUUC 3'


            ||:|||


target  3':ACCGGAAA 5'

 -7.90 1 RIC-seq