Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866620:139866632:[+] chr20:17511949:17511962:[-] nonBSJ supported CDS

circRNA 5':AGGUCUUCC-AGCA 3'


            || |||


target  3':ACCUUCUGCAUCGA 5'

 -4.20 1 RIC-seq
chrX:139866632:139866650:[+] chr20:17511946:17511962:[-] nonBSJ supported CDS

circRNA 5':AUCUCCAGGGCUUCCAGCA 3'


            ||| |:|:| |||


target  3':CAGACCUUCUGCA--UCGA 5'

 -7.50 2 RIC-seq
chrX:139866632:139866650:[+] chr20:17511947:17511962:[-] nonBSJ supported CDS

circRNA 5':AUCUCCAGGGCUUCCAGCA 3'


            ||| |:|:| |||


target  3': AGACCUUCUGCA--UCGA 5'

 -7.20 1 RIC-seq
chrX:139866637:139866650:[+] chr20:17511951:17511962:[-] nonBSJ supported CDS

circRNA 5':CAGGGCUUCCAGCA 3'


            |:|:| |||


target  3':CUUCUGCA--UCGA 5'

 -5.80 25 RIC-seq