Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866553:139866587:[+]	chr20:56224586:56224610:[-]	nonBSJ supported	3UTR	circRNA 5':UUCCAGAAAAUA-UAUGUCUUCCAACUAAGCUACGU 3' \|\|\|\|\|\| \|\|\| :\|\|\| \|\|\|\| \|\|\| target 3':UAGGUCUGGUAUGGUAC----------UUCGUUGC 5'	-16.50	1	RIC-seq
chrX:139866629:139866651:[+]	chr20:56224582:56224608:[-]	nonBSJ supported	3UTR	circRNA 5':AGCAUCUCCAGGGCUU-CC----AGCAU 3' \|\|\| \|\|\|\|\|: \| \|\| \|\|\|\| target 3': UGUUUAGGUCUGGUAUGGUACUUCGUU 5'	-16.70	14	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr20:56224582:56224608:[-]	target	-	chr20:56224602-56224603	G>A	LAML-KR	ICGC
chr20:56224586:56224610:[-]	target	-	chr20:56224602-56224603	G>A	LAML-KR	ICGC