Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866127:139866143:[+] chr20:44687826:44687842:[+] nonBSJ supported 3UTR

circRNA 5':GGCCUCCAGGUCUU--CCA 3'


            || |||||| ||


target  3':ACGC--GUCCAGUCCCGGG 5'

 -12.60 25 RIC-seq
chrX:139866629:139866650:[+] chr20:44687819:44687840:[+] nonBSJ supported 3UTR

circRNA 5':AGCAUCUCCAGGGCUUCCA-GCA 3'


            ||| ||||||:: ||


target  3':GCGUCCA-GUCCCGGGACCCCGA 5'

 -17.70 25 RIC-seq
chrX:139866630:139866650:[+] chr20:44687819:44687840:[+] nonBSJ supported 3UTR

circRNA 5': GCAUCUCCAGGGCUUCCA-GCA 3'


            ||| ||||||:: ||


target  3':GCGUCCA-GUCCCGGGACCCCGA 5'

 -18.00 2 RIC-seq