Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865598:139865638:[+]	chr2:166773774:166773807:[-]	nonBSJ supported	CDS	circRNA 5':ACGUCUUCCAGGAAAUCCAUGUCUUCCAAUAAUUUCAAGGU 3' \|:\| \|\| \|:\|\|\|\| \|\|\|\| \|\|\|\|\|: target 3':GGUAAAUUCGCCACU---UGCAGAUAGUUA----AGUUCUU 5'	-13.40	43	RIC-seq
chrX:139865606:139865638:[+]	chr2:166773779:166773807:[-]	nonBSJ supported	CDS	circRNA 5':CAGGAAAUCCAUGUCUUCCAAUAAUUUCAAGGU 3' \|:\| \|:\|\|\|\| \|\|\|\| \|\|\|\|\|: target 3':AUUCGCCACUUGCAGAUAGUUA----AGUUCUU 5'	-13.40	10	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr2:166773774:166773807:[-]	target	2143959	chr2:166773802-166773803	CAAGA>C	Jeune_thoracic_dystrophy\|Nephronophthisis	ClinVar
chr2:166773779:166773807:[-]	target	2143959	chr2:166773802-166773803	CAAGA>C	Jeune_thoracic_dystrophy\|Nephronophthisis	ClinVar