Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866380:139866390:[+] chrX:105280714:105280723:[-] nonBSJ supported CDS

circRNA 5':AAAGCCAUGUC 3'


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target  3':CUUCGGUACG 5'

 -13.20 1 RIC-seq
chrX:139866501:139866531:[+] chrX:105280704:105280720:[-] nonBSJ supported CDS

circRNA 5':CCAGAAAAUCCACGUCUUCCAACCAAGCCAU 3'


            |||| ||||||


target  3':AGUCUACGACC-------------UUCGGU 5'

 -8.00 1 RIC-seq
chrX:139866599:139866606:[+] chrX:105280717:105280723:[-] nonBSJ supported CDS

circRNA 5':UCCAUGUC 3'


            |||||:


target  3':CGGUACG 5'

 -7.10 1 RIC-seq
chrX:139866636:139866649:[+] chrX:105280704:105280719:[-] nonBSJ supported CDS

circRNA 5':CCAGG-GCUUCCAGC 3'


            |||: ||| |||


target  3':AGUCUACGACCUUCGG 5'

 -9.00 1 RIC-seq