5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866525:139866591:[+] | chr6:111210378:111210451:[+] | nonBSJ supported | Intron |
circRNA 5':AAGCCAUGUCUUCCAGAAAAUCCACG----------------UCUUCCAGAAAAUAUAUGUCUUCCAACUAAGCUACGUCUUC 3' |||||||| ||||| ||||| |||:||| |:||:| target 3':AUCGGUACAAU---UCUUUAAUUGAUGACCUUCACAGACCGAAGAAGUAAAGAA------AGAGGGUAAACUUAAAGUAGGAU 5' |
-24.80 | 1 | RIC-seq |
| chrX:139866532:139866554:[+] | chr6:111210379:111210401:[+] | nonBSJ supported | Intron |
circRNA 5':GUCUUCCAGAAAAUCCACGUCUU 3' |||:||| |:||: target 3':AAGAGGGUAAACUUAAAGUAGGA 5' |
-13.60 | 1 | RIC-seq |