Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865676:139865717:[+] chr10:13151157:13151192:[+] nonBSJ supported 5UTR

circRNA 5':UUCCAGAAAAAUCUGUGUCUUCCACCAAAUCCAAGUCUUCCA 3'


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target  3':CAGGUAAA---GGACAC-GAAAGUGACCCCGA--CAGGAGGA 5'

 -25.30 18 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr10:13151157:13151192:[+] target 1323386 chr10:13151191-13151192 A>AC OPTN-related_disorder|not_provided|Primary_open_angle_glaucoma|Amyotrophic_lateral_sclerosis_type_12|Glaucoma_1,_open_angle,_E ClinVar
chr10:13151157:13151192:[+] target 873264 chr10:13151191-13151192 AC>A Amyotrophic_lateral_sclerosis_type_12|not_provided|Glaucoma_1,_open_angle,_E|Primary_open_angle_glaucoma|Inborn_genetic_diseases ClinVar