Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866743:139866777:[+] chr12:116445308:116445340:[-] nonBSJ supported CDS

circRNA 5':CUGGCUCAAUAUCCAUGUCUUCC-AAC-GUCUCCAGU 3'


            ||| ||| ||: |||:|| ||| ||||||||


target  3':UACCCAGUAA---GUGAAGAGGGUUUGACAGAGGUC 5'

 -29.70 1 RIC-seq
chrX:139866743:139866780:[+] chr12:116445308:116445343:[-] nonBSJ supported CDS

circRNA 5':CUGGCUCAAUAUCCAUGUCUUCC-AAC-GUCUCCAGUGUG 3'


            ||| ||| ||: |||:|| ||| |||||||| ||


target  3':UACCCAGUAA---GUGAAGAGGGUUUGACAGAGGUC-CAA 5'

 -31.40 13 RIC-seq