Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865882:139865919:[+]	chr12:120196440:120196473:[-]	nonBSJ supported	CDS	circRNA 5': CUUCCAGUCAA-UCCAC-AUCUUCCGGAAAAAAUCCAGGU 3' \|\|\| \|\|\| \|\| \|\|\|\|\| \|\|\|:\|\| \|\|\|\|\|\| target 3':CGAA-GUCUGUCAAGGUGUUAGGAGACA------AGGUCCC 5'	-25.80	2	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139865882:139865919:[+]	circRNA	-	chrX:139865903-139865904	C>T	LINC-JP	ICGC