Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866206:139866236:[+] chr7:138235838:138235865:[+] nonBSJ supported CDS

circRNA 5':GGGUCUUCCAGGAAAUCCGUGUCUU-CCA-GCA 3'


            |||| ||| |::|| || ||


target  3':ACCAGUGACCCCUA----CGUAGUGUGGAACG 5'

 -14.00 1 RIC-seq
chrX:139866206:139866237:[+] chr7:138235837:138235865:[+] nonBSJ supported CDS

circRNA 5':GGGUCUUCCAGGAAAUCCGUGUCUU-CCA-GCAA 3'


            |||| ||| |::|| || |||


target  3':ACCAGUGACCCCUA----CGUAGUGUGGAACGU 5'

 -14.70 4 RIC-seq