Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866257:139866286:[+] chrX:128696444:128696470:[+] nonBSJ supported CDS

circRNA 5':GCCAUGUCUUCCAGACUAUCCA--UGUCUUCC 3'


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target  3':GGGUACU-AAGGUCA---AGGUUGACA-AAGA 5'

 -19.70 2 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chrX:128696444:128696470:[+] target 2814761 chrX:128696445-128696446 G>T Lowe_syndrome ClinVar
chrX:128696444:128696470:[+] target 2572389 chrX:128696467-128696468 TG>T Lowe_syndrome ClinVar