Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866202:139866243:[+] chr1:109441562:109441608:[+] nonBSJ supported CDS

circRNA 5':AUCCG-GGUCUU----------CCAGGAAAUCCGUGUCUUCCAGCAAGUCCAC 3'


            |||| ||: |||:||||| :|:| ||| ||||


target  3':AAGGCUCCGUCAAAGUUUAAGUGGUUCUUUAUAUAUA------CGUAAAGGUU 5'

 -24.60 14 RIC-seq
chrX:139866203:139866243:[+] chr1:109441562:109441608:[+] nonBSJ supported CDS

circRNA 5': UCCG-GGUCUU----------CCAGGAAAUCCGUGUCUUCCAGCAAGUCCAC 3'


            |||| ||: |||:||||| :|:| ||| ||||


target  3':AAGGCUCCGUCAAAGUUUAAGUGGUUCUUUAUAUAUA------CGUAAAGGUU 5'

 -24.60 13 RIC-seq