5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865693:139865750:[+] | chr13:20635197:20635242:[+] | nonBSJ supported | CDS |
circRNA 5': UCUUC-CACCAAA-UCCAAGUCUUCCAGUAAAUCUAGUUCUUCCAGAAAAAUCUAGAUCU 3' ||||| ||| ||||| ||| |||||||| | || || target 3':UAGAAGAGUGACGACAGGUUACCUC-GUCC--------------GUCUUUUU-GUCCUUGAC 5' |
-19.70 | 1 | RIC-seq |
| chrX:139865693:139865751:[+] | chr13:20635197:20635242:[+] | nonBSJ supported | CDS |
circRNA 5': UCUUC-CACCAAA-UCCAAGUCUUCCAGUAAAUCUAGUUCUUCCAGAAAAAUCUAGAUCUU 3' ||||| ||| ||||| ||| |||||||| | || || target 3':UAGAAGAGUGACGACAGGUUACCUC-GUCC--------------GUCUUUUU-GUCCUUGAC 5' |
-20.00 | 25 | RIC-seq |
| chrX:139865760:139865783:[+] | chr13:20610998:20611022:[+] | nonBSJ supported | CDS |
circRNA 5':UCAGU-GUCUUCCAGAAAGAAAUCC 3' |||: :||||| ||||||| target 3':UGUCGUUAGAAGUGACGUCUUUAGA 5' |
-17.00 | 5 | RIC-seq |
| chrX:139865760:139865793:[+] | chr13:20610991:20611022:[+] | nonBSJ supported | CDS |
circRNA 5':UCAGU-GUCUUCCAGAAAGAAAUCCAGGUCUUCCA 3' |||: :||||| ||||||| |||: || target 3':UGUCGUUAGAAGUGACGUCUUUAG----AGAGUGUU 5' |
-18.30 | 7 | RIC-seq |
| chrX:139865799:139865822:[+] | chr13:20610998:20611022:[+] | nonBSJ supported | CDS |
circRNA 5':UCAGU-GUCUUCCAGAAAGAAAUCC 3' |||: :||||| ||||||| target 3':UGUCGUUAGAAGUGACGUCUUUAGA 5' |
-17.00 | 4 | RIC-seq |
| chrX:139865799:139865832:[+] | chr13:20610991:20611022:[+] | nonBSJ supported | CDS |
circRNA 5':UCAGU-GUCUUCCAGAAAGAAAUCCAGGUCUUCCA 3' |||: :||||| ||||||| |||: || target 3':UGUCGUUAGAAGUGACGUCUUUAG----AGAGUGUU 5' |
-18.30 | 5 | RIC-seq |
| chrX:139866682:139866708:[+] | chr13:20635281:20635306:[+] | nonBSJ supported | CDS |
circRNA 5':CAGCAUCUCUGUGUCUUCCAGCAUCUU 3' |||| ||||||:|| ||||||| target 3':UUCGUUGAGACAUAGUUC-UCGUAGAC 5' |
-29.00 | 13 | RIC-seq |
| chrX:139866687:139866708:[+] | chr13:20635281:20635301:[+] | nonBSJ supported | CDS |
circRNA 5':UCUCUGUGUCUUCCAGCAUCUU 3' ||||||:|| ||||||| target 3':UGAGACAUAGUUC-UCGUAGAC 5' |
-22.80 | 1 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr13:20635281:20635301:[+] | target | 1698733 | chr13:20635285-20635286 | T>TG | Neurodevelopmental-craniofacial_syndrome_with_variable_renal_and_cardiac_abnormalities | ClinVar |
| chr13:20635281:20635306:[+] | target | 1698733 | chr13:20635285-20635286 | T>TG | Neurodevelopmental-craniofacial_syndrome_with_variable_renal_and_cardiac_abnormalities | ClinVar |