Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866116:139866162:[+] chr13:20333488:20333539:[-] nonBSJ supported CDS

circRNA 5': CAUCUUCCAAUGGCCU-CCAGGUCUUC-----CAGACUA-UCCAUGUCUUCCAG 3'


            || |||| |||| ||| ||||| ||:||| |||||| |||||


target  3':AGUCGAAGAG-ACCGUUCGGU--AGAAGUAGUAGUUUGACGAGGUACCCAAGGUG 5'

 -36.70 1 RIC-seq
chrX:139866123:139866162:[+] chr13:20333494:20333539:[-] nonBSJ supported CDS

circRNA 5': CAAUGGCCU-CCAGGUCUUC-----CAGACUA-UCCAUGUCUUCCAG 3'


            | |||| ||| ||||| ||:||| |||||| |||||


target  3':AGAGACCGUUCGGU--AGAAGUAGUAGUUUGACGAGGUACCCAAGGUG 5'

 -31.90 1 RIC-seq