Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866168:139866182:[+] chr8:54967300:54967315:[-] nonBSJ supported Intron

circRNA 5':CCUUGUCUUCC-CUUA 3'


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target  3':AGAACAGAAGGUGAAA 5'

 -18.80 1 RIC-seq
chrX:139866168:139866197:[+] chr8:54967300:54967341:[-] nonBSJ supported Intron

circRNA 5':CCUUGUCUUCC-CUUAA--------AUCUAUAG---CUUCCA 3'


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target  3':AGAACAGAAGGUGAAAUGACAAGGAUAGUCAUCAGAGGAGGA 5'

 -23.90 1 RIC-seq