Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865335:139865417:[+]	chr8:22880228:22880278:[-]	nonBSJ supported	CDS	circRNA 5': UCCAGGGUUUCCGAUGGCACCUGUGUCAAGGUCUUCCAACAACUCCGGGUCUUCCAGCGACUUCAAGUCUUCCAAUAAUCUCA 3' \|\|\|\|\|:\|:\|: ::\|\| \|\| \|\|\|\|:\|\| ::\|\|\|\|\| \|\| \|\|\|\|\|\|\|: \|\|\|\| target 3':AAGGUCUCGAG-----UUGUU--CA-----CCAGGAG-----------UUAGAAGA-CGAACC-GUUCAGAG-------AGAG 5'	-41.30	1	RIC-seq
chrX:139865335:139865421:[+]	chr8:22880228:22880282:[-]	nonBSJ supported	CDS	circRNA 5': UCCAGGGUUUCCGAUGGCACCUGUGUCAAGGUCUUCCAACAACUCCGGGUCUUCCAGCGACUUCAAGUCUUCCAAUAAUCUCAAGGU 3' \|\|\|\|\|:\|:\|: ::\|\| \|\| \|\|\|\|:\|\| ::\|\|\|\|\| \|\| \|\|\|\|\|\|\|: \|\|\|\| :\| target 3':AAGGUCUCGAG-----UUGUU--CA-----CCAGGAG-----------UUAGAAGA-CGAACC-GUUCAGAG-------AGAGGGUC 5'	-42.60	1	RIC-seq