Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865748:139865774:[+] chr1:170521972:170521998:[+] nonBSJ supported 3UTR

circRNA 5':UCUUCCAGUCAAUCAGUGUCUUCCAGA 3'


            ||||||||| :||||:||||


target  3':UGAAGGUCAGAAUUAUGCAGAGGGUCC 5'

 -30.60 1 RIC-seq
chrX:139865787:139865807:[+] chr1:170521975:170521998:[+] nonBSJ supported 3UTR

circRNA 5':UCUUCCAGUC--AAUCAGUGUCU 3'


            ||||||||| ||| || ||:


target  3':UGAAGGUCAGAAUUAUGCAGAGGG 5'

 -18.80 1 RIC-seq