5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA 3' interaction region | CircRNA 5' interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| - | chrX:139865339:139865402:[+] | chr6:150092325:150092375:[+] | BSJ supported | CDS |
circRNA 5':GGGUUUCCGAUGGCACCUGUGUCAA-GGUCUUCCAACAACUCCGGGUCUUCCAGCG--ACUUCAAGU 3' |||| ||| ||| ||||| || |||||: |||||||:| target 3': CCAAUGUAAAACGUAU-CACCCUCGCCAGA--------------CAUC-GGUCGUAGUGAAGUUUAU 5' |
-28.80 | 18 | RIC-seq |
| - | chrX:139865350:139865402:[+] | chr6:150092325:150092365:[+] | BSJ supported | CDS |
circRNA 5':GGCACCUGUGUCAA-GGUCUUCCAACAACUCCGGGUCUUCCAGCG--ACUUCAAGU 3' ||| ||| ||||| || |||||: |||||||:| target 3':ACGUAU-CACCCUCGCCAGA--------------CAUC-GGUCGUAGUGAAGUUUAU 5' |
-26.00 | 2 | RIC-seq |
| - | chrX:139865381:139865402:[+] | chr6:150092325:150092352:[+] | BSJ supported | CDS |
circRNA 5':GGGUCUU---CCAGCG--ACUUCAAGU 3' ||||| |||||: |||||||:| target 3':GCCAGACAUCGGUCGUAGUGAAGUUUAU 5' |
-23.80 | 1 | RIC-seq |
| chrX:139866793:139866824:+ | chrX:139865339:139865402:+ | chr6:150092325:150092376:[+] | BSJ supported | CDS |
circRNA 5':GGGGUUUCCGAUGGCACCUGUGUCAA-GGUCUUCCAACAACUCCGGGUCUUCCAGCG--ACUUCAAGU 3' ||||| ||| ||| ||||| || |||||: |||||||:| target 3': CCCAAUGUAAAACGUAU-CACCCUCGCCAGA--------------CAUC-GGUCGUAGUGAAGUUUAU 5' |
-32.10 | 1 | RIC-seq |