Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865457:139865480:[+] chr6:151247311:151247333:[+] nonBSJ supported CDS

circRNA 5': UCUUCCAGACAAUCCAUGUCUUCC 3'


            ||| | || ||||||| :|||:|


target  3':UAGACGUUC-GUUAGGU-UAGAGGA 5'

 -18.20 1 RIC-seq
chrX:139865970:139865993:[+] chr6:151247258:151247282:[+] nonBSJ supported CDS

circRNA 5':AUGUCUUCCAGAAAA-UCCAUGUCU 3'


            ||||:|| |||| || |||||


target  3':AACAGGAGAACUUUAGAGUUACAGU 5'

 -18.70 1 RIC-seq
chrX:139865971:139865993:[+] chr6:151247258:151247282:[+] nonBSJ supported CDS

circRNA 5': UGUCUUCCAGAAAA-UCCAUGUCU 3'


            ||||:|| |||| || |||||


target  3':AACAGGAGAACUUUAGAGUUACAGU 5'

 -18.70 27 RIC-seq
chrX:139865971:139865993:[+] chr6:151247259:151247282:[+] nonBSJ supported CDS

circRNA 5': UGUCUUCCAGAAAA-UCCAUGUCU 3'


            ||||:|| |||| || |||||


target  3':AACAGGAGAACUUUAGAGUUACAG 5'

 -18.70 1 RIC-seq
chrX:139865971:139865996:[+] chr6:151247311:151247334:[+] nonBSJ supported CDS

circRNA 5':UGUCUUCCAGAAAAUCCAUGUCUUCC 3'


            |||| | || |||||| :|||:|


target  3':GUAGACGUUCG-UUAGGU-UAGAGGA 5'

 -16.20 2 RIC-seq