Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865760:139865826:[+] chr10:96358171:96358242:[+] nonBSJ supported Intron

circRNA 5':UCAGU---GUCUUCCAGAAA---GAAAUCCAGGUCUUCCAGUCAAUCAGUGUCU-----UCCAGAAAGAAAUCCAGGU 3'


            ||:| ||||: |:||| :|||: |||: ||:| ||| ||:|| :|||| ||||::


target  3':UGUUAACCCAGAGUUUUUUUUGUUUUUGACUCCGU---GUUACCGAGU-ACGGAUAUUAGGGUCGAAUG--AGGUUUC 5'

 -28.90 2 RIC-seq
chrX:139865878:139865885:[+] chr10:96358230:96358236:[+] nonBSJ supported Intron

circRNA 5':AGGUCUUC 3'


            |||||:


target  3':CCCAGAG 5'

 -7.80 2 RIC-seq