Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866599:139866661:[+]	chr9:126532240:126532300:[-]	nonBSJ supported	Intron	circRNA 5':UCCAUGUCUUCCUAUAUCUCCAGGUCUUCCAGCAUCUC-CAGGGCUU-CCAGCAUCUGCUCGUCU 3' \|\| \|\|\| \|\|\|\| \|\|\| \|\|\|\| \|\|: \|\|\|\| \|\|\|:\|\|\|\| \|:\| target 3': GG-ACAAU-GGAUCCUUGUCUCCCCC-GGUCCUAAUCUGUUGCGAAGGGUUGUAGUUAUCCGGU 5'	-34.60	1	RIC-seq
chrX:139866618:139866650:[+]	chr9:126532274:126532306:[-]	nonBSJ supported	Intron	circRNA 5':CCAG-GUCUUCCAGCAUCUCCAGGGCUUCCA-GCA 3' \|\|: \|: \|:\|\|\|:\|\|\|\| :\|\|\|: :\| target 3':UGUUGCGAAGGGUUGUAGUUA-UCCGGUUUAGUG 5'	-24.90	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr9:126532240:126532300:[-]	target	-	chr9:126532278-126532279	C>T	PACA-CA	ICGC
chr9:126532274:126532306:[-]	target	-	chr9:126532278-126532279	C>T	PACA-CA	ICGC