5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865431:139865445:[+] | chr9:115234229:115234243:[+] | nonBSJ supported | 3UTR |
circRNA 5':AAUCCUGAGCUUCCA 3' ||||| |||||| target 3':CUAGGAGACGAAGGA 5' |
-18.20 | 1 | RIC-seq |
| chrX:139865348:139865394:[+] | chr9:115216342:115216379:[+] | nonBSJ supported | CDS |
circRNA 5':AUGGCACCUGUGUCAAGGUCUUCCAACAACUCCGGGUCUUCCAGCGA 3' |::|| | |: |||||| ||| ||||:|: :|| target 3': AUUGUUAAGAUUUACAAAGAAGG-UGUCGAGGUCU-------UGCA 5' |
-24.10 | 2 | RIC-seq |
| chrX:139865399:139865441:[+] | chr9:115216343:115216385:[+] | nonBSJ supported | CDS |
circRNA 5':AAGUCUUCCAAUAA-UCUCAAGG--UCUUCCAGAUAAUCCUGAGCU 3' ||||:| ||:|| ||| || ||||||| | ||| ||:| target 3': UCAGGAA-UUGUUAAGAUUUACAAAGAAGGUGUCG-AGGUCUUGC 5' |
-26.80 | 2 | RIC-seq |