5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865433:139865475:[+] | chr9:127113965:127114001:[+] | nonBSJ supported | 3UTR |
circRNA 5':UCCUGAGCUUCCAGAAAAUCCACAU-CUUCCAGACAAUCCAUGU 3' ||| |||| |||| ||| ||||| :||||| target 3': GGAAGCGAAAAGAUA-UAGG-GUACGAAGGAA----GGGUACC 5' |
-25.50 | 19 | RIC-seq |
| chrX:139865487:139865499:[+] | chr9:127113973:127113984:[+] | nonBSJ supported | 3UTR |
circRNA 5':UCCAUGUCUUCCA 3' ||||| ||||| target 3':GGGUAC-GAAGGA 5' |
-15.80 | 1 | RIC-seq |
| chrX:139866719:139866792:[+] | chr9:127088620:127088673:[+] | nonBSJ supported | CDS |
circRNA 5':AACAACU--ACCCAGU-CUUCCAUCAACUGGCUCAAUAUCCAUGUCUUCCAACGUCUCCA--GUGUGCUGAUCUUCUGA 3' ||| || || ||| ||||||| |||| ||| ||||| :|| ||:| |||||| target 3':GUGUCGACGUGUUUCAUGAAGGUA--UGAC-----------------AGG----AGAGGCCCUACUCGGC--GAAGACG 5' |
-36.80 | 1 | RIC-seq |
| chrX:139866719:139866798:[+] | chr9:127088616:127088673:[+] | nonBSJ supported | CDS |
circRNA 5':AACAACU--ACCCAGU-CUUCCAUCAACUGGCUCAAUAUCCAUGUCUUCCAACGUCUCCA--GUGUGCUGAUCUUCUGACAUUCA 3' ||| || || ||| ||||||| |||| ||| ||||| :|| ||:| |||||| | ||| target 3':GUGUCGACGUGUUUCAUGAAGGUA--UGAC-----------------AGG----AGAGGCCCUACUCGGC--GAAGAC-G-AAGA 5' |
-38.20 | 19 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chrX:139866719:139866798:[+] | circRNA | - | chrX:139866793-139866794 | C>T | LICA-CN | ICGC |