Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865544:139865579:[+] chr9:115946062:115946083:[-] nonBSJ supported CDS

circRNA 5':AGUCUUCCAGCAAUUACUGGUCUUCCACCAAAUCCA 3'


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target  3':ACAG--------UAA-GACAAGAAGA-----UAGGC 5'

 -10.70 1 RIC-seq
chrX:139865544:139865583:[+] chr9:115946062:115946086:[-] nonBSJ supported CDS

circRNA 5':AGUCUUCCAGCAAUUACUGGUCUUCCACCAAAUCCAGAUC 3'


            ||| ||| ||| ||||| |||| |||


target  3':ACAG--------UAA-GACAAGAAGA-----UAGG-CUAA 5'

 -11.50 11 RIC-seq