Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865451:139865457:[+]	chr9:110068748:110068754:[+]	nonBSJ supported	CDS	circRNA 5':UCCACAU 3' \|\|\|\|\| target 3':CGGUGUC 5'	-6.40	1	RIC-seq
chrX:139865469:139865486:[+]	chr9:110068769:110068784:[+]	nonBSJ supported	CDS	circRNA 5':UCCAUGUCUUCCGGACAA 3' \|\|\| \| \| \|\|\|\|\| target 3':CGGUUCCGUC--CCUGUC 5'	-8.40	1	RIC-seq
chrX:139865469:139865513:[+]	chr9:110068746:110068784:[+]	nonBSJ supported	CDS	circRNA 5':UCCAUGUCUUCCGGACAAUCCAU---GUCUUCCAAGAAGCUCCAAGUC 3' \|\|\| \| \| \|\|\|\|\| \|:\|\| \| \|\|\|: \| \|\|\| target 3':CGGUUCCGUC--CCUGUCCCCAACCUCGGA-----C-UCGGUG-UCAA 5'	-12.50	9	RIC-seq
chrX:139865480:139865535:[+]	chr9:110068750:110068807:[+]	nonBSJ supported	CDS	circRNA 5':CGGACAAUCCAUGUCUUCCAAGAAGCU----CCAAGUCUUC--CAGUAAAUCAAGUCUU--CCA 3' \|\|\| \|\|: \|\|\|\| \|\|\|\|\| \| \|\|\| \|\|:\|\| \|\|\| target 3':ACCU-------ACGUCCACACCUUCACCCCCGGUUCCGUCCCUGUCCCCAACCUCGGACUCGGUG 5'	-15.10	13	RIC-seq