Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866023:139866038:[+] chr2:9546027:9546041:[-] nonBSJ supported 3UTR

circRNA 5':CCACGUCUUCCCAACA 3'


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target  3':AGUGAC-AAGGUCUGG 5'

 -8.10 1 RIC-seq
chrX:139866257:139866272:[+] chr2:9546842:9546857:[-] nonBSJ supported 3UTR

circRNA 5':GCCAUG-UCUUCCAGAC 3'


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target  3':AGGUAAAAGAA-GUCUU 5'

 -11.90 1 RIC-seq
chrX:139866268:139866295:[+] chr2:9546835:9546862:[-] nonBSJ supported 3UTR

circRNA 5':CAGACUAUCCAUG-UCUUCCAGAAAAUCC 3'


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target  3':AUGUGUUAGGUAAAAGAA-GUCUUUUAGA 5'

 -23.10 1 RIC-seq