Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865651:139865675:[+] chr5:95224391:95224413:[-] nonBSJ supported 3UTR

circRNA 5':ACAGAUCUUCCAGCUAAUCCAUGUC 3'


            |||| ||||| |||:


target  3': GUCUUUCUCGUCGAAGCUUUACG 5'

 -11.50 13 RIC-seq
chrX:139865652:139865675:[+] chr5:95224392:95224413:[-] nonBSJ supported 3UTR

circRNA 5':CAGAUCUUCCAGCUAAUCCAUGUC 3'


            ||| ||||| |||:


target  3': UCUUUCUCGUCGAAGCUUUACG 5'

 -8.70 1 RIC-seq
chrX:139865660:139865675:[+] chr5:95224399:95224413:[-] nonBSJ supported 3UTR

circRNA 5':CCAGCUAAUCCAUGUC 3'


            ||||| |||:


target  3':CGUCGAAGCUUUACG 5'

 -7.70 1 RIC-seq
chrX:139865678:139865698:[+] chr5:95224391:95224407:[-] nonBSJ supported 3UTR

circRNA 5':CCAGAAAAAUCUGUGUCUUCC 3'


            |||||| |:: ||||


target  3': GUCUUUCU---CGUCGAAGC 5'

 -8.10 1 RIC-seq
chrX:139865708:139865716:[+] chr5:95224400:95224407:[-] nonBSJ supported 3UTR

circRNA 5':AAGUCUUCC 3'


            || ||||


target  3':GUC-GAAGC 5'

 -4.70 1 RIC-seq