5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866421:139866466:[+] | chr12:4413095:4413169:[+] | nonBSJ supported | 3UTR |
circRNA 5':UGUGUC-UUCCAACAAAGGUAC-GUCU-UCCAACAA--------------------------AGGUACGUCUUCC 3' |:|: :||| | |:| |:| ||| | ||| |||||| target 3':UCGCGUCGAGGCAGACUUCUCAACGGUUAGGACGAUCGUUACCCUACGUCGCACUACGACAGUCCCAACAGAAGA 5' |
-19.00 | 1 | RIC-seq |
| chrX:139866472:139866519:[+] | chr12:4413137:4413182:[+] | nonBSJ supported | 3UTR |
circRNA 5':AGGUAUGUCUUCCAACAAAGGUACGUCUUCCAGAAAAUCCACGUCUUC 3' || ||: || | ||||| ||| ||| :||:| target 3':AUCUGACGUCCCUUCGCGUCGAGGCAGACU-UCUCAACGGU-UAGGAC 5' |
-17.20 | 1 | RIC-seq |
| chrX:139866723:139866779:[+] | chr12:4409696:4409757:[+] | nonBSJ supported | 3UTR |
circRNA 5': ACUAC---CCAGUCUUCCAU-CAACUGGCUCAAUAUCCAUGU-CUUCCAACGUCUCCAGUGU 3' ||||| || | ||| || ||||| || |||| |:||:| |:|| target 3':UUGAUGUGAGGACUGAAUCAUUGUCCACCGACUCUCGUUUCCACGAAGAG-GUAGGGUUUACC 5' |
-27.10 | 2 | RIC-seq |
| chrX:139866726:139866768:[+] | chr12:4390139:4390183:[+] | nonBSJ supported | Intron |
circRNA 5':ACCCAGUCUUCCAUCAACUGGCUCAAUAUCCAU--GUCU-UCCAAC 3' ||||| ||:|| |||||:| |:| :|||| target 3':AGGGUCCGAGGGAUGA-GACCGGGGCCUCGACCGUCGGUCGGGUUU 5' |
-33.70 | 2 | RIC-seq |