Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866190:139866242:[+] chr6:109175497:109175569:[+] nonBSJ supported 5UTR

circRNA 5':AGCUUCCAAAAAAUCCG-------GGUCUUCCA---GGAAAUCC------------GUGUCUUCCAGCAAGUCCA 3'


            ||||| ||||||| ||| :|| ||||| |||


target  3':ACGAAGUGAAUACUAAAGACGUGACCAGAAGACGAACCUGUGACUUCCAACUAUUUUACCU-AGGUCAAA-AGGA 5'

 -23.40 2 RIC-seq
chrX:139866278:139866304:[+] chr6:109175563:109175588:[+] nonBSJ supported 5UTR

circRNA 5':AUG-UCUUCCAGAAAAUCCUUGUCUUCC 3'


            || |||| |||| ||||


target  3':GACAAGAAUUACGUAAA-GAAC-GAAGU 5'

 -8.50 2 RIC-seq