Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866186:139866210:[+] chr11:118395082:118395109:[+] nonBSJ supported 3UTR

circRNA 5':CUAUAGCUU--CCAAAAAAUCC--GGGUC 3'


            ||:||| ||| ||| |||:


target  3':CGUGUCGUCUCGGUACUC-AGGACCCCGU 5'

 -15.40 2 RIC-seq
chrX:139866798:139866821:[+] chr11:118394073:118394097:[+] nonBSJ supported 3UTR

circRNA 5': AGGUCUUCCAGUG-UCUG-CAAUAUC 3'


            |||| ||| | ||: |||:||


target  3':GUCCACC--GUCUCAAGGGAGUUGUAU 5'

 -11.60 1 RIC-seq
chrX:139866798:139866826:[+] chr11:118394068:118394097:[+] nonBSJ supported 3UTR

circRNA 5': AGGUCUUCCAGUG-UCUG-CAAUAUCCAGGU 3'


            |||| ||| | ||: |||:|| ||||


target  3':GUCCACC--GUCUCAAGGGAGUUGUAU-UCCAC 5'

 -15.30 3 RIC-seq