Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866188:139866214:[+] chr3:136085900:136085914:[-] nonBSJ supported CDS

circRNA 5':AUAGCUUCCAAAAAAUCCGGGUCUUCC 3'


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target  3':AAUCGAAG------------UAGAAGA 5'

 -13.00 7 RIC-seq
chrX:139866188:139866224:[+] chr3:136085900:136085924:[-] nonBSJ supported CDS

circRNA 5':AUAGCUUCCAAAAAAUCCGGGUCUUCCAGGAAAUCCG 3'


            ||||||| :||||| |:||


target  3':AAUCGAAG------------UAGAAGAAGUAGUGGGA 5'

 -17.20 8 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr3:136085900:136085914:[-] target 633008 chr3:136085912-136085913 T>TC Intellectual_disability,_autosomal_dominant_47 ClinVar
chr3:136085900:136085924:[-] target 633008 chr3:136085912-136085913 T>TC Intellectual_disability,_autosomal_dominant_47 ClinVar