Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866204:139866235:[+]	chr1:210026748:210026780:[+]	nonBSJ supported	3UTR	circRNA 5':CCGGGUCUUCCAGGAA-AU-CC-GUGUCUUCCAGC 3' \|:\| \|\|\|:\|\| \|\| \|\| \|\|\|\| :\|\|\|\|\| target 3':CGUCAUUC-GGUUCUAGUACGGUCACAUGAGGUC 5'	-23.10	14	RIC-seq
chrX:139866204:139866235:[+]	chr1:210026748:210026796:[+]	nonBSJ supported	3UTR	circRNA 5':CCGGGUCUU---------------CCAGGAA-AU-CC-GUGUCUUCCAGC 3' \|\|\|\| \|\|\|:\|\| \|\| \|\| \|\|\|\| :\|\|\|\|\| target 3':AGCCCUCCGUGUCUAACGUCAUUCGGUUCUAGUACGGUCACAUGAGGUC 5'	-25.60	16	RIC-seq
chrX:139866215:139866236:[+]	chr1:210026831:210026857:[+]	nonBSJ supported	3UTR	circRNA 5':AGGAAAUCCGUGUCU-----UCCAGCA 3' \|\| \|:\|:\|\| :\|\|\|\|\| target 3':ACCACCGUACGCGGACAUCAGGGUCGA 5'	-16.90	1	RIC-seq
chrX:139866341:139866362:[+]	chr1:210026831:210026857:[+]	nonBSJ supported	3UTR	circRNA 5':AGGAAAUCCGUGUCU-----UCCAGCA 3' \|\| \|:\|:\|\| :\|\|\|\|\| target 3':ACCACCGUACGCGGACAUCAGGGUCGA 5'	-16.90	1	RIC-seq