Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866382:139866430:[+] chr1:68591639:68591684:[-] nonBSJ supported 3UTR

circRNA 5':AGCCAUGUCUUCCAUCAAAUUAAUGUCUUC-CAGCCUACUUGUGUCUU-CC 3'


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target  3':AUGAUACAGUGAUUAAUU--GUUACU--AGUGUCUUUU--ACACAGUAUGGU 5'

 -18.20 4 RIC-seq
chrX:139866544:139866560:[+] chr1:68608410:68608437:[-] nonBSJ supported Intron

circRNA 5':AUCCACGU---------CUUC--CAGAA 3'


            ||||||| |:|| ||||


target  3':AAGGUGCAAGUAAAGUUGGAGUCGUCUC 5'

 -14.90 2 RIC-seq