Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865418:139865455:[+] chr1:155932705:155932747:[-] nonBSJ supported CDS

circRNA 5':AGGUCUU-CCAGAUAAU-CCUGAGCUUC----CAGAAAAUCCAC 3'


            ||||:| || |||| ||| |||| |:|||


target  3':CCCAGGACGGAAAAGGGUGGAC-CGACUACUCGUCUAGUGGGUU 5'

 -27.00 1 RIC-seq
chrX:139865413:139865455:[+] chr1:155932699:155932747:[-] nonBSJ supported Intron

circRNA 5':UCUCAA-GGUCUU-CCAGAUAAU-CCUGAGCUUC----CAGAAAAUCCAC 3'


            |:|| ||||:| || |||| ||| |||| |:|||


target  3':UGGGUCCCCAGGACGGAAAAGGGUGGAC-CGACUACUCGUCUAGUGGGUU 5'

 -29.40 2 RIC-seq