Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866093:139866147:[+] chr2:70504772:70504823:[+] nonBSJ supported 3UTR

circRNA 5':AGC-CAUGUCUUCCAGAAAAUCCACAUCUUCCAAUGGCCUCCAGGUC-UUC-------CAGACU 3'


            || ||: | ||| |||| :||| |:: |||||||| ||| |||||


target  3':CCGAGUGACGUUGGU------GGUG---GAGG--AUU-GAGGUCCACUAAGAAUAAUAGUCUGU 5'

 -32.80 1 RIC-seq
chrX:139866112:139866147:[+] chr2:70504772:70504812:[+] nonBSJ supported 3UTR

circRNA 5':UCCACAUCUUCCAAUGGCCUCCAGGUC-UUC-------CAGACU 3'


            |||| |:||| |:: |||||||| ||| |||||


target  3':UGGUGGUGGAGG--AUU-GAGGUCCACUAAGAAUAAUAGUCUGU 5'

 -31.10 1 RIC-seq