5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865801:139865820:[+] | chr2:198948642:198948658:[+] | nonBSJ supported | CDS |
circRNA 5':AGUGUCUUCCAGAAAGAAAU 3' ||| |||||| |||| target 3':ACAC---AGGUCUCACUUUU 5' |
-13.00 | 26 | RIC-seq |
| chrX:139865835:139865882:[+] | chr2:198948491:198948527:[+] | nonBSJ supported | CDS |
circRNA 5':CAGUCAGUGUCUUCCAGAAAAAUCUACGUCUUCCACCAAAUCCA-GGUC 3' || || || ||| |||||||||| ||| target 3':UUCUGUGCCAAAAGAA------------AGAAGGUGGUGUAAAAACCAA 5' |
-21.40 | 1 | RIC-seq |
| chrX:139866051:139866057:[+] | chr2:198949208:198949214:[+] | nonBSJ supported | CDS |
circRNA 5':CGGAUAA 3' ||||| target 3':AUCUAUA 5' |
-3.40 | 17 | RIC-seq |
| chrX:139866174:139866180:[+] | chr2:198950069:198950075:[+] | nonBSJ supported | CDS |
circRNA 5':CUUCCCU 3' ||||| target 3':AAAGGGU 5' |
-7.50 | 23 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr2:198948491:198948527:[+] | target | - | chr2:198948498-198948499 | A>C | RECA-EU | ICGC |
| chr2:198948491:198948527:[+] | target | - | chr2:198948521-198948522 | G>A | LINC-JP | ICGC |