Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866121:139866156:[+] chr2:217538607:217538636:[-] nonBSJ supported 3UTR

circRNA 5':UCCAAUGGCCUCCAGGUCUUCCAGACUAUC-CAUGUC 3'


            ||| || ||||| |:||| ||||:


target  3':UGGUCGACG--GGUCCUC----UUUGAGGACGUACG 5'

 -17.70 22 RIC-seq
chrX:139866140:139866174:[+] chr2:217538607:217538633:[-] nonBSJ supported 3UTR

circRNA 5':UCCAGACUAUCCAUGUCUUCCAGAAAAUCCUUGUC 3'


            |||| || :||| | ||||| ||| ||:


target  3':UGGUC-GACGGGUCC------UCUUUGAGG-ACGU 5'

 -17.70 2 RIC-seq