Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865779:139865797:[+] chr2:58392911:58392929:[-] nonBSJ supported CDS

circRNA 5':AAUCCAGGUCUUCCAGUCA 3'


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target  3':AUGGGUCCAGAAGAGUAGC 5'

 -24.80 25 RIC-seq
chrX:139865818:139865836:[+] chr2:58392911:58392929:[-] nonBSJ supported CDS

circRNA 5':AAUCCAGGUCUUCCAGUCA 3'


            |:|||||||||| :||


target  3':AUGGGUCCAGAAGAGUAGC 5'

 -24.80 8 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr2:58392911:58392929:[-] target 2675679 chr2:58392914-58392915 C>T Fanconi_anemia_complementation_group_L|Fanconi_anemia ClinVar