Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866328:139866345:[+] chr2:152982842:152982859:[-] nonBSJ supported CDS

circRNA 5':AUCCAGGUCUUCCAGGAA 3'


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target  3':AAGGUCUCGAAGGUCCUG 5'

 -25.30 13 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr2:152982842:152982859:[-] target - chr2:152982856-152982857 G>T LICA-CN ICGC