Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865854:139865884:[+] chr3:42688372:42688409:[+] nonBSJ supported 3UTR

circRNA 5':AAAUCUACGUCU--UCCA------CCAAAUCCAGGUCUU 3'


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target  3':GUUAGGA-CGGACGAGGUCCCCUGGGGUUGGGUGUAGAC 5'

 -23.20 3 RIC-seq
chrX:139865617:139865626:[+] chr3:42671552:42671562:[+] nonBSJ supported Exon

circRNA 5':UGUCU-UCCAA 3'


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target  3':UCAGUCAGGUG 5'

 -7.60 2 RIC-seq