Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865953:139865963:[+] chr5:167871576:167871586:[+] nonBSJ supported CDS

circRNA 5':CGUCUUCCAGA 3'


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target  3':ACAGAAGGUCA 5'

 -16.00 2 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr5:167871576:167871586:[+] target - chr5:167871585-167871586 C>T PACA-CA ICGC