Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865956:139865976:[+] chr5:64892937:64892957:[-] nonBSJ supported CDS

circRNA 5':CUUCCAGAAA-AUCCAUGUCUU 3'


            |||||| ||||| :||:


target  3':AAAGGUCGUGGUAGGU-UAGGA 5'

 -17.40 18 RIC-seq
chrX:139865956:139865977:[+] chr5:64892937:64892958:[-] nonBSJ supported CDS

circRNA 5':CUUCCAGAAA-AUCCAUGUCUUC 3'


            |||||| ||||| :||:|


target  3':AAAGGUCGUGGUAGGU-UAGGAU 5'

 -17.80 1 RIC-seq
chrX:139865974:139865994:[+] chr5:64892937:64892957:[-] nonBSJ supported CDS

circRNA 5':CUUCCAGAAA-AUCCAUGUCUU 3'


            |||||| ||||| :||:


target  3':AAAGGUCGUGGUAGGU-UAGGA 5'

 -17.40 13 RIC-seq