Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866233:139866255:[+] chr5:137904615:137904640:[-] nonBSJ supported CDS

circRNA 5':AGCAAGUC-CA--CGUCUUC--CAACAA 3'


            || |||| | |:||||| |||||


target  3':ACG-UCAGAGAAAGUAGAAGUAGUUGU 5'

 -18.40 29 RIC-seq
chrX:139866242:139866255:[+] chr5:137904626:137904640:[-] nonBSJ supported CDS

circRNA 5':ACGUCUUC--CAACAA 3'


            |:||||| |||||


target  3':AGUAGAAGUAGUUGU 5'

 -12.40 1 RIC-seq