Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866495:139866519:[+] chr5:43704604:43704628:[+] nonBSJ supported 3UTR

circRNA 5':CGUCUUCCAGAAAAUCCACGU-CUUC 3'


            |||||| |||| | |||


target  3':UCAGAAGUAAAAG-AGGUUCUCGAAA 5'

 -12.50 2 RIC-seq
chrX:139866530:139866541:[+] chr5:43656784:43656795:[+] nonBSJ supported CDS

circRNA 5':AUGUCUUCCAGA 3'


            ||:|||||||


target  3':CACGGAAGGUCC 5'

 -16.50 1 RIC-seq