Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866620:139866639:[+] chr5:43291084:43291101:[-] nonBSJ supported 3UTR

circRNA 5':AGGUCUUCCAGCAUCUCCAG 3'


            |||| ||||| |||||


target  3':AUCAGUAGGUCC--GAGGUA 5'

 -20.10 2 RIC-seq
chrX:139865697:139865731:[+] chr5:43294224:43294254:[-] nonBSJ supported CDS

circRNA 5':CCACCAAAUCCAAG--UCUUCCAGUAAAUCUAGUU-CU 3'


            ||| ||||| |||||| |||:|| ||


target  3':UGUG----AGGUUAAGAGAAGGGAC----GAUUAACGAC 5'

 -15.90 2 RIC-seq