Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865467:139865498:[+]	chr6:139501215:139501251:[+]	nonBSJ supported	3UTR	circRNA 5':AAUCCAUGUCUUCCGGACAAU------CCAUGUCU-UCC 3' \|:\|\|\| \|\|:\|\| :\|\| \|\|\|\|\|\|\|\| \|\| target 3':GUGGGUU--GAGGGGUUGAAGUACCGUGGUACAGAUAGA 5'	-25.60	2	RIC-seq
chrX:139866416:139866429:[+]	chr6:139488417:139488431:[+]	nonBSJ supported	CDS	circRNA 5': CUACUUGUGUCUUC 3' \|\| \|::\|\|\|\|\|: target 3':AGAGUAGUACAGAGC 5'	-9.50	1	RIC-seq
chrX:139866416:139866438:[+]	chr6:139488364:139488393:[+]	nonBSJ supported	CDS	circRNA 5': CUACUUGUGUC-----UUCCAACAAAGG 3' \|:\|\|: \|\|\| \|\|\| \|\|\|\| \|\| target 3':AGGUGGUCACCCUUGACAAGCUUGUGGCCC 5'	-11.90	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr6:139488417:139488431:[+]	target	-	chr6:139488425-139488426	G>T	RECA-EU	ICGC