Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865480:139865489:[+] chr6:110426763:110426771:[-] nonBSJ supported CDS

circRNA 5':CGGACAAUCC 3'


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target  3': CCUGCUAGA 5'

 -7.40 1 RIC-seq
chrX:139865823:139865829:[+] chr6:110426766:110426772:[-] nonBSJ supported CDS

circRNA 5':AGGUCUU 3'


            |:|||


target  3':GCUAGAU 5'

 -4.70 2 RIC-seq
chrX:139865878:139865884:[+] chr6:110426766:110426772:[-] nonBSJ supported CDS

circRNA 5':AGGUCUU 3'


            |:|||


target  3':GCUAGAU 5'

 -4.70 1 RIC-seq
chrX:139866154:139866178:[+] chr6:110428296:110428313:[-] nonBSJ supported CDS

circRNA 5':GUCUUCCAGAAAAUCCUUGUCUUCC 3'


            |||||| |||:||:||


target  3':AGGAAGGA-------GAAUAGGAGA 5'

 -14.90 13 RIC-seq
chrX:139866460:139866484:[+] chr6:110428296:110428313:[-] nonBSJ supported CDS

circRNA 5':GUCUUCCAACAAAGGUAUGUCUUCC 3'


            |||||| |:||:||


target  3':AGGAAGGAGA-------AUAGGAGA 5'

 -10.80 13 RIC-seq